PhyloVelo

Main

  • Intallation
  • Pseudotime
  • References

Tutorials

  • Getting Start
  • Simulate phylogeny-resolved scRNA-seq data using PhyloVelo
  • Run PhyloVelo in simulation data
  • Run PhyloVelo in C.elegans data
  • KPtracer - mouse tumor evolution
  • Apply PhyloVelo to clonal lineage tracing data - Larry
  • Apply PhyloVelo to clonal lineage tracing data - TCR

Model Comparsion

  • C.elegans
  • Erythroid
  • KP 3726
  • API Reference
    • phylovelo
PhyloVelo
  • API Reference
  • View page source

API Reference

This page contains auto-generated API reference documentation [1].

  • phylovelo
    • phylovelo.ana_utils
    • phylovelo.data_struct
    • phylovelo.elegans_util
    • phylovelo.embedding
    • phylovelo.gene_expr
    • phylovelo.gillespie_variable_paras
    • phylovelo.inference
    • phylovelo.pseudo_time
    • phylovelo.sim_utils
[1]

Created with sphinx-autoapi

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